Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | ASD34_04490 | Not Available | Negative | 2024971 - 2026392 | 52102.9 |
| lysine transporter lyse | ASD34_04495 | Not Available | Positive | 2026523 - 2027122 | 21184.7 |
| multidrug dmt transporter permease | ASD34_04500 | Not Available | Positive | 2027125 - 2028078 | 33495.8 |
| lactoylglutathione lyase | ASD34_04505 | Not Available | Positive | 2028090 - 2028497 | 14248.9 |
| 2-aminoadipate aminotransferase | ASD34_04510 | Not Available | Positive | 2028553 - 2029746 | 42419.4 |
| arac family transcriptional regulator | ASD34_04515 | Not Available | Positive | 2029761 - 2030384 | 21519.0 |
| lysine transporter lyse | ASD34_04520 | Not Available | Positive | 2030410 - 2031075 | 23097.0 |
| glutathione s-transferase | ASD34_04525 | Not Available | Positive | 2031081 - 2031722 | 24241.8 |
| phenazine biosynthesis protein phzf | ASD34_04530 | Not Available | Positive | 2031719 - 2032651 | 32684.0 |
| hypothetical protein | ASD34_04535 | Not Available | Positive | 2032666 - 2033364 | 24510.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
