Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_04440 | Not Available | Negative | 2013909 - 2015819 | 69683.1 |
| dtdp-glucose 4,6-dehydratase | ASD34_04445 | Not Available | Negative | 2015816 - 2016775 | 35224.0 |
| phosphoheptose isomerase | ASD34_04450 | Not Available | Negative | 2016843 - 2017472 | 22178.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | ASD34_04455 | Not Available | Negative | 2017579 - 2018127 | 20215.9 |
| glucose-1-phosphate thymidylyltransferase | ASD34_04460 | Not Available | Negative | 2018124 - 2019011 | 32483.8 |
| dtdp-4-dehydrorhamnose reductase | ASD34_04465 | Not Available | Negative | 2019055 - 2019945 | 31984.0 |
| dtdp-glucose 4,6-dehydratase | ASD34_04470 | Not Available | Negative | 2019942 - 2021021 | 39996.1 |
| amino acid dehydrogenase | ASD34_04475 | Not Available | Positive | 2021471 - 2022772 | 47440.7 |
| hypothetical protein | ASD34_04480 | Not Available | Negative | 2022792 - 2024072 | 44634.9 |
| hypothetical protein | ASD34_04485 | Not Available | Negative | 2024122 - 2024910 | 27546.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
