Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | ASD34_04340 | Not Available | Negative | 1990783 - 1991517 | 25347.7 |
| gntr family transcriptional regulator | ASD34_04345 | Not Available | Positive | 1991690 - 1992397 | 25984.1 |
| abc transporter substrate-binding protein | ASD34_04350 | Not Available | Positive | 1992444 - 1993451 | 36856.0 |
| abc transporter permease | ASD34_04355 | Not Available | Positive | 1993463 - 1994020 | 21171.0 |
| abc transporter permease | ASD34_04360 | Not Available | Positive | 1994070 - 1995467 | 49966.9 |
| galactonate dehydratase | ASD34_04365 | Not Available | Positive | 1995470 - 1997008 | 54219.5 |
| dehydrogenase | ASD34_04370 | Not Available | Positive | 1997080 - 1998138 | 36485.8 |
| hypothetical protein | ASD34_04375 | Not Available | Negative | 1998135 - 1999019 | 29850.2 |
| dihydroorotate oxidase | ASD34_04380 | Not Available | Negative | 1999227 - 1999877 | 23514.3 |
| acetylglutamate kinase | ASD34_04385 | Not Available | Negative | 1999966 - 2000859 | 31455.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
