Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | ASD34_00855 | Not Available | Negative | 183175 - 184341 | 40894.4 |
| short-chain dehydrogenase | ASD34_00860 | Not Available | Negative | 184401 - 185135 | 25481.8 |
| cyclase | ASD34_00865 | Not Available | Negative | 185132 - 185947 | 29798.2 |
| short-chain dehydrogenase | ASD34_00870 | Not Available | Negative | 185964 - 187217 | 45295.6 |
| acetyl-coa acetyltransferase | ASD34_00875 | Not Available | Negative | 187214 - 188386 | 41708.6 |
| atp-dependent acyl-coa ligase | ASD34_00880 | Not Available | Negative | 188383 - 190017 | 58469.5 |
| phenylpropionate dioxygenase | ASD34_00885 | Not Available | Negative | 190028 - 190525 | 19273.9 |
| oxidoreductase | ASD34_00890 | Not Available | Negative | 190525 - 191838 | 49780.8 |
| ferredoxin | ASD34_00895 | Not Available | Negative | 191871 - 192857 | 35422.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 193593 - 193961 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
