Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa acetyltransferase | ASD34_04080 | Not Available | Positive | 1934822 - 1936012 | 42009.5 |
| pimeloyl-coa dehydrogenase large subunit | ASD34_04085 | Not Available | Positive | 1936031 - 1937239 | 44070.7 |
| pimeloyl-coa dehydrogenase small subunit | ASD34_04090 | Not Available | Positive | 1937251 - 1938393 | 40180.9 |
| enoyl-coa hydratase | ASD34_04095 | Not Available | Positive | 1938390 - 1939205 | 28423.1 |
| coa-transferase | ASD34_04100 | Not Available | Positive | 1939282 - 1940490 | 43255.0 |
| abc transporter substrate-binding protein | ASD34_04105 | Not Available | Positive | 1940523 - 1941521 | 35191.8 |
| acyl-coa synthetase | ASD34_04110 | Not Available | Positive | 1941568 - 1943505 | 68046.6 |
| abc transporter substrate-binding protein | ASD34_04115 | Not Available | Positive | 1943562 - 1944560 | 35509.2 |
| nitronate monooxygenase | ASD34_04130 | Not Available | Positive | 1945948 - 1946919 | 34764.2 |
| c4-dicarboxylate abc transporter | ASD34_04135 | Not Available | Positive | 1947226 - 1947813 | 21488.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
