Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | ASD34_00805 | Not Available | Negative | 172204 - 172980 | 26334.4 |
| short-chain dehydrogenase | ASD34_00810 | Not Available | Negative | 173033 - 173782 | 25390.4 |
| atp-dependent acyl-coa ligase | ASD34_00815 | Not Available | Negative | 173779 - 175374 | 56954.1 |
| abc transporter atp-binding protein | ASD34_00820 | Not Available | Negative | 175364 - 176095 | 26226.7 |
| hypothetical protein | ASD34_00825 | Not Available | Negative | 176092 - 177879 | 63073.4 |
| abc transporter permease | ASD34_00830 | Not Available | Negative | 177876 - 178931 | 36359.8 |
| branched-chain amino acid abc transporter substrate-binding protein | ASD34_00835 | Not Available | Negative | 178993 - 180156 | 40736.3 |
| aromatic-ring-hydroxylating dioxygenase | ASD34_00840 | Not Available | Negative | 180196 - 180660 | 17681.0 |
| oxidoreductase | ASD34_00845 | Not Available | Negative | 180657 - 181976 | 48648.8 |
| branched-chain amino acid abc transporter substrate-binding protein | ASD34_00850 | Not Available | Negative | 182003 - 183148 | 39788.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
