Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | ASD34_03675 | Not Available | Positive | 1848111 - 1848968 | 29395.3 |
| monofunctional biosynthetic peptidoglycan transglycosylase | ASD34_03680 | Not Available | Positive | 1848965 - 1849708 | 27406.3 |
| hypothetical protein | ASD34_03685 | Not Available | Negative | 1849653 - 1850090 | 15922.9 |
| glycerol acyltransferase | ASD34_03690 | Not Available | Positive | 1850100 - 1850939 | 30113.6 |
| phosphatidate cytidylyltransferase | ASD34_03695 | Not Available | Positive | 1850944 - 1851933 | 36862.7 |
| hypothetical protein | ASD34_03700 | Not Available | Negative | 1851954 - 1854035 | 75551.8 |
| crossover junction endodeoxyribonuclease ruvc | ASD34_03705 | Not Available | Positive | 1854185 - 1854733 | 18987.0 |
| serine hydroxymethyltransferase | ASD34_03710 | Not Available | Negative | 1854738 - 1856060 | 45867.2 |
| lysr family transcriptional regulator | ASD34_03715 | Not Available | Positive | 1856167 - 1857114 | 33941.1 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | ASD34_03720 | Not Available | Negative | 1857327 - 1858250 | 33922.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
