Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_03625 | Not Available | Positive | 1836343 - 1836852 | 18545.1 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | ASD34_03630 | Not Available | Negative | 1836865 - 1837983 | 40497.3 |
| hypothetical protein | ASD34_03635 | Not Available | Negative | 1838219 - 1838695 | 16237.0 |
| protease tldd | ASD34_03640 | Not Available | Negative | 1838834 - 1840294 | 51371.1 |
| rod shape-determining protein roda | ASD34_03645 | Not Available | Negative | 1840343 - 1841497 | 41214.0 |
| histidine kinase | ASD34_03650 | Not Available | Negative | 1841530 - 1843365 | 67087.2 |
| luxr family transcriptional regulator | ASD34_03655 | Not Available | Negative | 1843372 - 1844115 | 26430.6 |
| esterase | ASD34_03660 | Not Available | Positive | 1844395 - 1844988 | 22321.8 |
| ribonuclease ii | ASD34_03665 | Not Available | Positive | 1845096 - 1847171 | 74644.7 |
| energy transducer tonb | ASD34_03670 | Not Available | Positive | 1847224 - 1848075 | 31470.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
