Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_03525 | Not Available | Positive | 1811716 - 1812369 | 23228.0 |
| response regulator glrr | ASD34_03530 | Not Available | Positive | 1812431 - 1813819 | 50293.7 |
| glucosyl transferase family 2 | ASD34_03535 | Not Available | Positive | 1814222 - 1816228 | 72936.0 |
| signal recognition particle | ASD34_03540 | Not Available | Negative | 1816370 - 1817764 | 49865.6 |
| cytochrome c assembly protein | ASD34_03545 | Not Available | Positive | 1817957 - 1818769 | 28742.7 |
| hypothetical protein | ASD34_03550 | Not Available | Positive | 1818766 - 1819023 | 9440.42 |
| pas domain-containing sensor histidine kinase | ASD34_03555 | Not Available | Positive | 1819020 - 1820717 | 61712.8 |
| fis family transcriptional regulator | ASD34_03560 | Not Available | Positive | 1820723 - 1822270 | 55469.2 |
| anhydro-n-acetylmuramyl-tripeptide amidase | ASD34_03565 | Not Available | Positive | 1822257 - 1822874 | 22956.6 |
| ribonucleotide-diphosphate reductase subunit alpha | ASD34_03570 | Not Available | Positive | 1823223 - 1826135 | 107921.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
