Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-aminoadipate aminotransferase | ASD34_03425 | Not Available | Positive | 1790493 - 1792007 | 55565.0 |
| rok family transcriptional regulator | ASD34_03430 | Not Available | Negative | 1791980 - 1792906 | 31838.1 |
| hypothetical protein | ASD34_03435 | Not Available | Negative | 1792958 - 1793152 | 7266.28 |
| histidinol phosphate phosphatase | ASD34_03440 | Not Available | Negative | 1793162 - 1793938 | 27367.7 |
| abc transporter permease | ASD34_03445 | Not Available | Negative | 1794039 - 1794908 | 31699.5 |
| sulfonate abc transporter atp-binding protein | ASD34_03450 | Not Available | Negative | 1794905 - 1795666 | 28430.5 |
| nitrate abc transporter substrate-binding protein | ASD34_03455 | Not Available | Negative | 1795825 - 1796835 | 36237.4 |
| taurine dioxygenase | ASD34_03460 | Not Available | Negative | 1796868 - 1797764 | 33534.9 |
| hypothetical protein | ASD34_03465 | Not Available | Negative | 1798121 - 1799233 | 40133.9 |
| short-chain dehydrogenase | ASD34_03470 | Not Available | Positive | 1799273 - 1800055 | 28068.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
