Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | ASD34_03375 | Not Available | Negative | 1779564 - 1780181 | 23091.7 |
| lytic transglycosylase | ASD34_03380 | Not Available | Positive | 1780191 - 1782221 | 74440.3 |
| methyltransferase | ASD34_03385 | Not Available | Positive | 1782223 - 1782795 | 19871.4 |
| glutathione s-transferase | ASD34_03390 | Not Available | Positive | 1782905 - 1783591 | 25205.4 |
| hypothetical protein | ASD34_03395 | Not Available | Negative | 1783620 - 1784357 | 26048.0 |
| phosphatase | ASD34_03400 | Not Available | Positive | 1784523 - 1785794 | 46759.5 |
| trehalose phosphatase | ASD34_03405 | Not Available | Positive | 1785867 - 1786661 | 28155.9 |
| glucoamylase | ASD34_03410 | Not Available | Positive | 1786658 - 1788592 | 71763.3 |
| trehalose-6-phosphate synthase | ASD34_03415 | Not Available | Positive | 1788589 - 1789974 | 52137.5 |
| hypothetical protein | ASD34_03420 | Not Available | Negative | 1789982 - 1790320 | 12085.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
