Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_26080 | Not Available | Positive | 1560518 - 1561456 | 32143.6 |
| potassium transporter | ASD34_26085 | Not Available | Negative | 1561473 - 1563458 | 71288.8 |
| arabinose 5-phosphate isomerase | ASD34_26090 | Not Available | Positive | 1563709 - 1564710 | 34708.6 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | ASD34_26095 | Not Available | Positive | 1564710 - 1565258 | 19660.7 |
| lps export abc transporter periplasmic protein lptc | ASD34_26100 | Not Available | Positive | 1565255 - 1565905 | 23907.5 |
| short-chain dehydrogenase | ASD34_26105 | Not Available | Positive | 1565949 - 1566734 | 27318.9 |
| rna-binding protein | ASD34_26110 | Not Available | Negative | 1566844 - 1567383 | 16472.8 |
| hypothetical protein | ASD34_26115 | Not Available | Positive | 1567839 - 1568402 | 20183.4 |
| methionine biosynthesis protein metw | ASD34_26125 | Not Available | Positive | 1569863 - 1570450 | 21885.3 |
| impact family protein | ASD34_26130 | Not Available | Positive | 1570488 - 1571075 | 20392.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
