Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_25930 | Not Available | Negative | 1526834 - 1527439 | 22682.5 |
| penicillin-binding protein | ASD34_25935 | Not Available | Negative | 1527644 - 1530037 | 86773.7 |
| beta-hexosaminidase | ASD34_25940 | Not Available | Negative | 1530054 - 1531346 | 46306.1 |
| hypothetical protein | ASD34_25945 | Not Available | Negative | 1531343 - 1532830 | 53252.8 |
| trypsin | ASD34_25950 | Not Available | Positive | 1533047 - 1535107 | 74768.6 |
| exosortase | ASD34_25955 | Not Available | Positive | 1535123 - 1536043 | 32074.0 |
| hypothetical protein | ASD34_25960 | Not Available | Positive | 1536024 - 1536593 | 21177.3 |
| glycosyl transferase | ASD34_25965 | Not Available | Positive | 1536607 - 1537875 | 45788.2 |
| gcn5 family acetyltransferase | ASD34_25970 | Not Available | Positive | 1537872 - 1538636 | 27976.1 |
| pirin | ASD34_25975 | Not Available | Positive | 1538707 - 1539597 | 32492.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
