Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | ASD34_25630 | Not Available | Negative | 1468551 - 1469765 | 41942.4 |
| hypothetical protein | ASD34_25635 | Not Available | Negative | 1469762 - 1470406 | 23858.5 |
| hypothetical protein | ASD34_25640 | Not Available | Negative | 1470531 - 1471814 | 44198.7 |
| fad-dependent oxidoreductase | ASD34_25645 | Not Available | Positive | 1472301 - 1474103 | 66833.2 |
| crp/fnr family transcriptional regulator | ASD34_25650 | Not Available | Negative | 1474139 - 1474849 | 26008.3 |
| hypothetical protein | ASD34_25655 | Not Available | Negative | 1474867 - 1475229 | 13211.7 |
| 3-keto-5-aminohexanoate cleavage protein | ASD34_25660 | Not Available | Positive | 1475405 - 1476325 | 33441.4 |
| abc transporter permease | ASD34_25665 | Not Available | Positive | 1476360 - 1477568 | 42999.1 |
| 3-hydroxyacyl-coa dehydrogenase | ASD34_25670 | Not Available | Positive | 1477565 - 1478512 | 33571.1 |
| feruloyl-coa synthase | ASD34_25675 | Not Available | Positive | 1478514 - 1480322 | 64831.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
