Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver protein | ASD34_25380 | Not Available | Positive | 1417746 - 1418405 | 24147.4 |
| lysr family transcriptional regulator | ASD34_25385 | Not Available | Negative | 1418412 - 1419302 | 32179.4 |
| hypothetical protein | ASD34_25390 | Not Available | Positive | 1419393 - 1419587 | 7593.12 |
| hypothetical protein | ASD34_25395 | Not Available | Positive | 1419652 - 1421343 | 61652.4 |
| hypothetical protein | ASD34_25400 | Not Available | Negative | 1421474 - 1422097 | 24317.8 |
| uracil-dna glycosylase | ASD34_25405 | Not Available | Negative | 1422180 - 1422821 | 23772.9 |
| 2-methylisocitrate lyase | ASD34_25410 | Not Available | Negative | 1422793 - 1423623 | 28978.1 |
| serine dehydratase | ASD34_25415 | Not Available | Negative | 1423682 - 1425067 | 48085.1 |
| peptidase m20 | ASD34_25420 | Not Available | Negative | 1425072 - 1426241 | 41617.6 |
| branched-chain amino acid abc transporter permease | ASD34_25425 | Not Available | Negative | 1426267 - 1427616 | 45925.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
