Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter atp-binding protein | ASD34_25130 | Not Available | Negative | 1365970 - 1367004 | 37570.9 |
| peptide abc transporter permease | ASD34_25135 | Not Available | Negative | 1367018 - 1367932 | 32299.3 |
| peptide abc transporter | ASD34_25140 | Not Available | Negative | 1367958 - 1368893 | 33589.2 |
| peptide abc transporter permease | ASD34_25145 | Not Available | Negative | 1368910 - 1370490 | 57089.6 |
| microcystin lr degradation protein mlrc-like protein | ASD34_25150 | Not Available | Negative | 1370533 - 1371984 | 51580.3 |
| fad-dependent oxidoreductase | ASD34_25155 | Not Available | Negative | 1372028 - 1373182 | 41033.2 |
| xre family transcriptional regulator | ASD34_25160 | Not Available | Positive | 1373388 - 1374101 | 25514.7 |
| hypothetical protein | ASD34_25165 | Not Available | Positive | 1374098 - 1374418 | 11510.7 |
| hypothetical protein | ASD34_25170 | Not Available | Positive | 1374473 - 1374823 | 13325.3 |
| hypothetical protein | ASD34_25175 | Not Available | Negative | 1374866 - 1375891 | 36482.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
