Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionic acid transporter | ASD34_03140 | Not Available | Negative | 1206309 - 1207730 | 51262.0 |
| 4-hydroxyphenylpyruvate dioxygenase | ASD34_03145 | Not Available | Negative | 1207786 - 1209675 | 68730.8 |
| 3-oxoadipate enol-lactonase | ASD34_03150 | Not Available | Negative | 1209817 - 1210593 | 27350.8 |
| mfs transporter | ASD34_03155 | Not Available | Negative | 1210590 - 1211849 | 43837.3 |
| carboxymuconolactone decarboxylase | ASD34_03160 | Not Available | Negative | 1211846 - 1212271 | 15778.0 |
| 3-carboxy-cis,cis-muconate cycloisomerase | ASD34_03165 | Not Available | Negative | 1212268 - 1213479 | 42479.3 |
| shikimate dehydrogenase | ASD34_03170 | Not Available | Negative | 1213496 - 1214329 | 29501.8 |
| shikimate dehydrogenase | ASD34_03175 | Not Available | Negative | 1214360 - 1215283 | 32850.7 |
| 4-hydroxyphenylpyruvate dioxygenase | ASD34_03180 | Not Available | Positive | 1215483 - 1216277 | 29076.1 |
| abc transporter substrate-binding protein | ASD34_03185 | Not Available | Positive | 1216352 - 1217359 | 35597.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
