Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | ASD34_02835 | Not Available | Negative | 1142959 - 1144077 | 40626.6 |
| acyl-coa dehydrogenase | ASD34_02840 | Not Available | Negative | 1144105 - 1145259 | 41033.7 |
| hypothetical protein | ASD34_02845 | Not Available | Negative | 1145256 - 1145654 | 14512.4 |
| methylmalonate-semialdehyde dehydrogenase | ASD34_02850 | Not Available | Negative | 1145651 - 1147174 | 53946.2 |
| lysr family transcriptional regulator | ASD34_02855 | Not Available | Positive | 1147335 - 1148243 | 33443.4 |
| hypothetical protein | ASD34_02860 | Not Available | Negative | 1148253 - 1149320 | 38115.0 |
| carnitine dehydratase | ASD34_02865 | Not Available | Negative | 1149333 - 1150730 | 49159.5 |
| succinyl-coa--3-ketoacid-coa transferase | ASD34_02870 | Not Available | Negative | 1150841 - 1151479 | 22396.5 |
| succinyl-coa--3-ketoacid-coa transferase | ASD34_02875 | Not Available | Negative | 1151481 - 1152287 | 28084.8 |
| luxr family transcriptional regulator | ASD34_02880 | Not Available | Positive | 1152380 - 1152946 | 20727.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
