Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 1111004 - 1111080 | Not Available |
| trehalose utilization | ASD34_24445 | Not Available | Positive | 1113550 - 1114611 | 37823.4 |
| dehydrogenase | ASD34_24450 | Not Available | Positive | 1114703 - 1116928 | 78041.9 |
| pyrroloquinoline quinone biosynthesis protein pqqb | ASD34_24455 | Not Available | Positive | 1117099 - 1118019 | 32864.4 |
| pyrroloquinoline quinone biosynthesis protein pqqc | ASD34_24460 | Not Available | Positive | 1118024 - 1118770 | 28476.8 |
| pyrroloquinoline quinone biosynthesis protein pqqd | ASD34_24465 | Not Available | Positive | 1118767 - 1119036 | 10130.0 |
| pyrroloquinoline quinone biosynthesis protein pqqe | ASD34_24470 | Not Available | Positive | 1119014 - 1120183 | 43186.8 |
| prolyl aminopeptidase | ASD34_24475 | Not Available | Positive | 1120197 - 1121129 | 33312.9 |
| hyalin | ASD34_24480 | Not Available | Negative | 1121110 - 1122537 | 50086.1 |
| l-dehydroascorbate transporter large permease subunit | ASD34_24485 | Not Available | Negative | 1122542 - 1123822 | 44780.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
