Streptomyces sp. Root1295

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces sp. Root1295 is a notable bacterium characterized by the presence of flagella, which are essential for motility. This organism contains a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The genomic information for Streptomyces sp. Root1295 is documented under the accession number LMEL00000000.1, providing a reference point for further studies and analyses. The presence of flagella suggests that Streptomyces sp. Root1295 may be capable of active movement, which could be advantageous in its ecological niche, allowing it to navigate through soil or other substrates in search of nutrients. This motility could also facilitate interactions with plant roots or other microorganisms, potentially playing a role in symbiotic relationships or competition for resources. In summary, the flagellated nature and singular replicon of Streptomyces sp. Root1295 may enhance its ecological versatility, enabling it to thrive in diverse environments. Understanding the dynamics of this bacterium's motility and genetic structure could provide insights into its interactions within the soil microbiome and its potential applications in agriculture or biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. Root1295
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces sp. Root1295
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces sp. Root1295 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1305065 bp

Thymine Count

1309326 bp

Guanine Count

3304102 bp

Cytosine Count

3264561 bp

Genome Length

9196637 bp

Protein-coding Genes

7601 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyl transferaseASD29_33925C7QKE8Negative675313 - 67647942119.1
hypothetical proteinASD29_33930Not AvailablePositive676585 - 67809353964.6
hypothetical proteinASD29_33935Not AvailableNegative678062 - 67930642178.2
lipopolysaccharide biosynthesis proteinASD29_33940Not AvailableNegative679303 - 68099158828.3
glycosyl transferaseASD29_33945P32057Negative680988 - 68225044369.2
cytidyltransferaseASD29_33950Not AvailablePositive682402 - 68285116837.2
cdp-alcohol phosphatidyltransferaseASD29_33955Not AvailableNegative682820 - 68356025821.7
molybdenum cofactor biosysynthesis proteinASD29_33960Not AvailableNegative683649 - 68419418913.8
polyketide cyclaseASD29_33965Not AvailablePositive684370 - 68473813007.0
cation:proton antiporterASD29_33970O05227Negative684757 - 68511012444.5

Displaying genes 631 – 640 of 6497 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

418 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 418 metabolites

Health Effects

No health effects information available for this bacterium.