Rhizobacter sp. Root1221

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Genus

Rhizobacter

Description

Rhizobacter sp. Root1221 is characterized by possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The organism is cataloged under the accession number LMDI00000000.1, which provides a reference for researchers interested in studying its genetic makeup and potential applications in agricultural microbiology. As a member of the Rhizobacter genus, this species is likely to play a crucial role in plant interactions, particularly in promoting root health and enhancing nutrient uptake. Rhizobacteria are known for their ability to form beneficial relationships with plants, often leading to improved growth and resilience against environmental stresses. This trait is particularly valuable in sustainable agriculture, where enhancing plant growth through microbial assistance can reduce dependence on chemical fertilizers. The ecological insight derived from studying Rhizobacter sp. Root1221 emphasizes the importance of microbial diversity in soil health and plant growth. By understanding the genetic and functional characteristics of such microorganisms, researchers can potentially harness their capabilities for biotechnological applications, including biocontrol of pathogens and promotion of plant growth, thereby contributing to more sustainable agricultural practices. Overall, the study of Rhizobacter sp. Root1221 underscores the intricate relationships between soil microbiota and plant health.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobacter sp. Root1221 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1106362 bp

Thymine Count

1103843 bp

Guanine Count

2321774 bp

Cytosine Count

2332459 bp

Genome Length

6865017 bp

Protein-coding Genes

5827 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoglycerate kinaseASC87_29105Not AvailableNegative5327499 - 532869240948.4
branched-chain amino acid transporterASC87_29110Not AvailableNegative5328808 - 532913712089.3
branched-chain amino acid abc transporter permeaseASC87_29115Not AvailableNegative5329134 - 532985325204.5
protease htpxASC87_29125Not AvailableNegative5330397 - 533123630181.1
methionyl-trna formyltransferaseASC87_29130Not AvailableNegative5331307 - 533226033182.0
peptide deformylaseASC87_29135Not AvailableNegative5332260 - 533277219279.4
peptidoglycan-binding proteinASC87_29140Not AvailablePositive5333036 - 533420242392.8
dna processing protein dpraASC87_29145Not AvailablePositive5334258 - 533537338216.1
protein smgASC87_29150Not AvailablePositive5335474 - 533592616825.9
hypothetical proteinASC87_29155Not AvailableNegative5336571 - 533883883788.7

Displaying genes 4661 – 4670 of 5944 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.