Rhizobium sp. Root1203

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. Root1203 is a rod-shaped bacterium characterized by the presence of flagella, which enables motility. This organism possesses a single replicon, indicating a streamlined genetic organization that may facilitate efficient cellular processes. The available accession number for Rhizobium sp. Root1203 is LMCW00000000.1, which provides a reference for researchers seeking to explore its genomic and biological features further. In the context of its ecological role, Rhizobium species are well-known for their symbiotic relationships with leguminous plants, where they contribute to nitrogen fixation. This process enriches the soil with nitrogen compounds, promoting plant growth and enhancing soil fertility. The motility conferred by flagella may aid Rhizobium sp. Root1203 in navigating the rhizosphere, facilitating effective colonization of plant roots and establishing symbiotic interactions. Understanding the specific traits of Rhizobium sp. Root1203 can provide insights into its potential applications in sustainable agriculture, particularly in improving crop yield and soil health in nitrogen-poor environments. The ability to form symbiotic relationships underscores the ecological significance of this bacterium, not only in enhancing plant growth but also in contributing to the overall health of ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. Root1203
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. Root1203
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. Root1203 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1336722 bp

Thymine Count

1340975 bp

Guanine Count

2015696 bp

Cytosine Count

2011768 bp

Genome Length

6705461 bp

Protein-coding Genes

6141 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinASC97_15690Not AvailableNegative6322867 - 63231369701.55
hypothetical proteinASC97_15695Not AvailableNegative6323133 - 632354014806.7
hypothetical proteinASC97_15705Not AvailableNegative6324977 - 632541115415.7
monooxygenaseASC97_15710Not AvailablePositive6325553 - 63257356977.64
iron transporterASC97_15715P31517Positive6325747 - 632679939004.2
hemin abc transporter substrate-binding proteinASC97_15720Q56991Positive6326809 - 632773232146.1
iron abc transporterASC97_15725Q56992Positive6327735 - 632884737973.6
iron abc transporterASC97_15730Q1MCZ1Positive6328858 - 632964927988.9
hypothetical proteinASC97_15735Not AvailablePositive6329792 - 633014212759.1
hypothetical proteinASC97_15740Not AvailablePositive6330151 - 633055213823.6

Displaying genes 5941 – 5950 of 6301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

350 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000198tetracenomycin CC23H20O11Chemical structure of tetracenomycin CNot available
Average472.402Da
Monoisotopic472.100561464Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da

Displaying 1–10 of 350 metabolites

Health Effects

No health effects information available for this bacterium.