Aminobacter sp. DSM 101952 strain Root100

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Aminobacter

Description

Aminobacter sp. DSM 101952, designated as Root100, is characterized by having a single replicon. This trait is significant as it may influence the organism's genomic stability and replication dynamics. The strain is cataloged under the accession number LMCL00000000.1, which provides a reference for genomic and taxonomic studies. The classification of Aminobacter sp. indicates its potential role in the nitrogen cycle, particularly in soil ecosystems, where members of this genus are known to be involved in nitrogen fixation and contribute to soil fertility. This ecological role is essential as it supports plant growth and agricultural productivity by converting atmospheric nitrogen into a form that can be utilized by plants. In summary, Aminobacter sp. DSM 101952 stands out with its single replicon and its classification suggests its ecological importance in nutrient cycling, particularly concerning nitrogen dynamics in soil environments. This highlights the strain's potential applications in sustainable agriculture and soil management practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusAminobacter
SpeciesAminobacter sp. DSM 101952
Strainstrain Root100

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aminobacter sp. DSM 101952 strain Root100 contig_9, whole genome

Gene Summary

Adenine Count

951506 bp

Thymine Count

944615 bp

Guanine Count

1652156 bp

Cytosine Count

1691339 bp

Genome Length

5239945 bp

Protein-coding Genes

4837 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide abc transporterASC75_02255Not AvailablePositive474858 - 47638455912.0
peptide abc transporterASC75_02260Not AvailablePositive476447 - 47738833919.5
peptide abc transporter permeaseASC75_02265Not AvailablePositive477388 - 47825130385.2
peptide abc transporter atp-binding proteinASC75_02270Not AvailablePositive478255 - 47930438384.2
peptide abc transporter atp-binding proteinASC75_02275Not AvailablePositive479346 - 48030835015.2
hypothetical proteinASC75_02280Not AvailablePositive480312 - 48077316091.6
dcmp deaminaseASC75_02285Not AvailableNegative480863 - 48133916534.6
hypothetical proteinASC75_02290Not AvailableNegative481336 - 48197121810.9
multidrug mfs transporterASC75_02295Not AvailableNegative482198 - 48362549444.7
luxr family transcriptional regulatorASC75_02300Not AvailablePositive483783 - 48463130474.6

Displaying genes 471 – 480 of 4902 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.