Aminobacter sp. DSM 101952 strain Root100

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Aminobacter

Description

Aminobacter sp. DSM 101952, designated as Root100, is characterized by having a single replicon. This trait is significant as it may influence the organism's genomic stability and replication dynamics. The strain is cataloged under the accession number LMCL00000000.1, which provides a reference for genomic and taxonomic studies. The classification of Aminobacter sp. indicates its potential role in the nitrogen cycle, particularly in soil ecosystems, where members of this genus are known to be involved in nitrogen fixation and contribute to soil fertility. This ecological role is essential as it supports plant growth and agricultural productivity by converting atmospheric nitrogen into a form that can be utilized by plants. In summary, Aminobacter sp. DSM 101952 stands out with its single replicon and its classification suggests its ecological importance in nutrient cycling, particularly concerning nitrogen dynamics in soil environments. This highlights the strain's potential applications in sustainable agriculture and soil management practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusAminobacter
SpeciesAminobacter sp. DSM 101952
Strainstrain Root100

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aminobacter sp. DSM 101952 strain Root100 contig_9, whole genome

Gene Summary

Adenine Count

951506 bp

Thymine Count

944615 bp

Guanine Count

1652156 bp

Cytosine Count

1691339 bp

Genome Length

5239945 bp

Protein-coding Genes

4837 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uroporphyrinogen decarboxylaseASC75_15910Not AvailableNegative5050609 - 505164337732.8
phosphoenolpyruvate synthetase regulatory proteinASC75_15915Not AvailablePositive5052044 - 505286530163.4
septum formation inhibitor mafASC75_15920Not AvailablePositive5052919 - 505351821304.8
shikimate dehydrogenaseASC75_15925Not AvailablePositive5053511 - 505434729148.9
dephospho-coa kinaseASC75_15930Not AvailablePositive5054344 - 505493420794.3
dna polymerase iii subunit epsilonASC75_15935Not AvailablePositive5055003 - 505571926084.9
preprotein translocase subunit secbASC75_15940Not AvailableNegative5055782 - 505627617937.5
exclusion suppressor fxsaASC75_15945Not AvailableNegative5056388 - 505686116808.1
calcium-binding proteinASC75_15950Not AvailablePositive5057076 - 505778325850.5
transglycosylaseASC75_15955Not AvailablePositive5057806 - 505891239799.1

Displaying genes 4731 – 4740 of 4902 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.