Aminobacter sp. DSM 101952 strain Root100

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Aminobacter

Description

Aminobacter sp. DSM 101952, designated as Root100, is characterized by having a single replicon. This trait is significant as it may influence the organism's genomic stability and replication dynamics. The strain is cataloged under the accession number LMCL00000000.1, which provides a reference for genomic and taxonomic studies. The classification of Aminobacter sp. indicates its potential role in the nitrogen cycle, particularly in soil ecosystems, where members of this genus are known to be involved in nitrogen fixation and contribute to soil fertility. This ecological role is essential as it supports plant growth and agricultural productivity by converting atmospheric nitrogen into a form that can be utilized by plants. In summary, Aminobacter sp. DSM 101952 stands out with its single replicon and its classification suggests its ecological importance in nutrient cycling, particularly concerning nitrogen dynamics in soil environments. This highlights the strain's potential applications in sustainable agriculture and soil management practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusAminobacter
SpeciesAminobacter sp. DSM 101952
Strainstrain Root100

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aminobacter sp. DSM 101952 strain Root100 contig_9, whole genome

Gene Summary

Adenine Count

951506 bp

Thymine Count

944615 bp

Guanine Count

1652156 bp

Cytosine Count

1691339 bp

Genome Length

5239945 bp

Protein-coding Genes

4837 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coproporphyrinogen iii oxidaseASC75_15810Not AvailableNegative5028781 - 503012748989.5
transcriptional regulatorASC75_15815Not AvailablePositive5030277 - 503100226788.2
hypothetical proteinASC75_15820Not AvailableNegative5031012 - 503140414555.3
peptidase s41ASC75_15825Not AvailablePositive5031645 - 503326160511.5
peptidase s41ASC75_15830Not AvailablePositive5033272 - 503400327176.3
nitrogen fixation protein fixqASC75_15835Not AvailablePositive5034014 - 50341635461.58
cytochrome c oxidase cbb3ASC75_15840Not AvailablePositive5034167 - 503503030856.0
cytochrome c oxidase accessory protein ccogASC75_15845Not AvailablePositive5035196 - 503675258031.5
cytochrome oxidaseASC75_15850Not AvailablePositive5036749 - 503724618178.7
nitrogen fixation protein fixiASC75_15855Not AvailablePositive5037243 - 503951679102.7

Displaying genes 4711 – 4720 of 4902 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.