Aminobacter sp. DSM 101952 strain Root100

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Aminobacter

Description

Aminobacter sp. DSM 101952, designated as Root100, is characterized by having a single replicon. This trait is significant as it may influence the organism's genomic stability and replication dynamics. The strain is cataloged under the accession number LMCL00000000.1, which provides a reference for genomic and taxonomic studies. The classification of Aminobacter sp. indicates its potential role in the nitrogen cycle, particularly in soil ecosystems, where members of this genus are known to be involved in nitrogen fixation and contribute to soil fertility. This ecological role is essential as it supports plant growth and agricultural productivity by converting atmospheric nitrogen into a form that can be utilized by plants. In summary, Aminobacter sp. DSM 101952 stands out with its single replicon and its classification suggests its ecological importance in nutrient cycling, particularly concerning nitrogen dynamics in soil environments. This highlights the strain's potential applications in sustainable agriculture and soil management practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusAminobacter
SpeciesAminobacter sp. DSM 101952
Strainstrain Root100

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aminobacter sp. DSM 101952 strain Root100 contig_9, whole genome

Gene Summary

Adenine Count

951506 bp

Thymine Count

944615 bp

Guanine Count

1652156 bp

Cytosine Count

1691339 bp

Genome Length

5239945 bp

Protein-coding Genes

4837 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrate abc transporterASC75_01800Not AvailableNegative366522 - 36765540011.3
abc transporter permeaseASC75_01805Not AvailableNegative367652 - 36853031308.2
hypothetical proteinASC75_01810Not AvailableNegative368580 - 36912219667.6
sulfonate abc transporter atp-binding proteinASC75_01815Not AvailableNegative369124 - 36993929971.9
dihydropyrimidinaseASC75_01820Not AvailableNegative370122 - 37157353323.6
zn-dependent hydrolaseASC75_01825Not AvailableNegative371725 - 37297545430.9
omega amino acid--pyruvate aminotransferaseASC75_01830Not AvailableNegative373145 - 37447347991.0
tetr family transcriptional regulatorASC75_01835Not AvailablePositive374713 - 37534524190.3
hypothetical proteinASC75_01840Not AvailablePositive375448 - 37617325737.1
alkylhydroperoxidaseASC75_01845Not AvailableNegative376240 - 37669816976.5

Displaying genes 381 – 390 of 4902 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.