Aminobacter sp. DSM 101952 strain Root100

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Aminobacter

Description

Aminobacter sp. DSM 101952, designated as Root100, is characterized by having a single replicon. This trait is significant as it may influence the organism's genomic stability and replication dynamics. The strain is cataloged under the accession number LMCL00000000.1, which provides a reference for genomic and taxonomic studies. The classification of Aminobacter sp. indicates its potential role in the nitrogen cycle, particularly in soil ecosystems, where members of this genus are known to be involved in nitrogen fixation and contribute to soil fertility. This ecological role is essential as it supports plant growth and agricultural productivity by converting atmospheric nitrogen into a form that can be utilized by plants. In summary, Aminobacter sp. DSM 101952 stands out with its single replicon and its classification suggests its ecological importance in nutrient cycling, particularly concerning nitrogen dynamics in soil environments. This highlights the strain's potential applications in sustainable agriculture and soil management practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusAminobacter
SpeciesAminobacter sp. DSM 101952
Strainstrain Root100

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aminobacter sp. DSM 101952 strain Root100 contig_9, whole genome

Gene Summary

Adenine Count

951506 bp

Thymine Count

944615 bp

Guanine Count

1652156 bp

Cytosine Count

1691339 bp

Genome Length

5239945 bp

Protein-coding Genes

4837 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive206428 - 207917Not Available
cobalt chelataseASC75_01015Not AvailablePositive207276 - 210896128721.0
23s ribosomal rnaNot AvailableNot AvailablePositive208705 - 211523Not Available
cobalamin biosynthesis protein cobgASC75_01020Not AvailablePositive210893 - 21243451845.1
5s ribosomal rnaNot AvailableNot AvailablePositive211725 - 211839Not Available
precorrin-8x methylmutaseASC75_01025Not AvailablePositive212437 - 21306922143.5
precorrin-2 c(20)-methyltransferaseASC75_01030Not AvailablePositive213066 - 21381826881.3
precorrin-3b c17-methyltransferaseASC75_01035Not AvailablePositive213815 - 21457927243.8
cobalt-precorrin-6x reductaseASC75_01040Not AvailableNegative214543 - 21530726925.4
precorrin-6y methyltransferaseASC75_01045Not AvailablePositive215462 - 21669142899.8

Displaying genes 221 – 230 of 4902 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.