Novosphingobium sp. Fuku2-ISO-50 PRJNA299316_c054

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. Fuku2-ISO-50, designated under the accession LLZR00000000.1, is a bacterial strain characterized by the presence of flagella, which implies motility capabilities. The organism has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The genus Novosphingobium is known for its ecological roles, particularly in the degradation of environmental pollutants and the bioremediation of contaminated sites. The presence of flagella suggests that Novosphingobium sp. Fuku2-ISO-50 may be capable of movement toward nutrient sources or away from harmful substances, enhancing its survival in diverse habitats. In summary, the combination of motility and a single replicon in Novosphingobium sp. Fuku2-ISO-50 supports its potential ecological role in bioremediation, allowing it to navigate and thrive in various substrates, which is crucial for its function in ecosystem health and pollutant degradation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. Fuku2-ISO-50
StrainPRJNA299316_c054

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. Fuku2-ISO-50 PRJNA299316_c054, whole genome

Gene Summary

Adenine Count

813765 bp

Thymine Count

777927 bp

Guanine Count

1378359 bp

Cytosine Count

1444353 bp

Genome Length

4414404 bp

Protein-coding Genes

3825 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xylose isomeraseAQZ50_00280Not AvailableNegative60590 - 6139028072.2
hypothetical proteinAQZ50_00285Not AvailablePositive61537 - 6222925306.2
hypothetical proteinAQZ50_00290Not AvailableNegative62264 - 6334940696.7
hypothetical proteinAQZ50_00295Not AvailablePositive63367 - 6386717995.5
short-chain dehydrogenaseAQZ50_00300Not AvailableNegative63877 - 6461725522.8
tonb-dependent receptorAQZ50_00305Not AvailableNegative64668 - 6698383650.5
hypothetical proteinAQZ50_00310Not AvailableNegative67190 - 6842246524.7
hypothetical proteinAQZ50_00315Not AvailableNegative68422 - 686317482.93
choline dehydrogenaseAQZ50_00320Not AvailablePositive68821 - 7047358838.6
hypothetical proteinAQZ50_00325Not AvailablePositive70470 - 7157338012.2

Displaying genes 71 – 80 of 3886 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.