Bradyrhizobium jicamae strain PAC68

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium jicamae strain PAC68 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which contribute to its motility. This strain thrives at an optimal temperature of 29°C, placing it within the mesophilic temperature range, making it well-suited for growth in moderate temperature environments. Genetically, Bradyrhizobium jicamae strain PAC68 has been documented to possess a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The strain is cataloged under the accession number LLXZ00000000.1, which provides a reference for researchers seeking to study its genetic and biochemical properties further. An ecological insight into Bradyrhizobium jicamae strain PAC68 is its potential role in symbiotic relationships with plants, particularly in nitrogen fixation. The capacity of this strain to thrive in mesophilic conditions suggests it may be well-adapted to temperate agricultural systems. This adaptation could be beneficial for crop productivity, enhancing soil fertility through the biological fixation of atmospheric nitrogen, thereby reducing the need for chemical fertilizers.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium jicamae
Strainstrain PAC68

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bradyrhizobium jicamae strain PAC68
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium jicamae strain PAC68 contig_98, whole genome

Gene Summary

Adenine Count

1638349 bp

Thymine Count

1638436 bp

Guanine Count

2717734 bp

Cytosine Count

2720459 bp

Genome Length

8738846 bp

Protein-coding Genes

7745 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligaseCQ12_32005Not AvailablePositive8575464 - 857684048429.5
phospho-n-acetylmuramoyl-pentapeptide- transferaseCQ12_32010Not AvailablePositive8577005 - 857811139541.4
d,d-heptose 1,7-bisphosphate phosphataseCQ12_38410Not AvailableNegative8580160 - 858068719954.9
hypothetical proteinCQ12_38415Not AvailableNegative8580820 - 858169531581.0
hypothetical proteinCQ12_38420Not AvailableNegative8583180 - 858349111870.5
hypothetical proteinCQ12_38425Not AvailablePositive8584606 - 858518120820.5
amp-dependent synthetaseCQ12_38430Not AvailableNegative8585550 - 858677343452.1
mannose-6-phosphate isomeraseCQ12_38435Not AvailablePositive8586863 - 858802342809.5
abc transporter atp-binding proteinCQ12_38440Not AvailableNegative8588038 - 858887730610.5
branched-chain amino acid abc transporter substrate-binding proteinCQ12_38445Not AvailableNegative8589066 - 859034644576.9

Displaying genes 7691 – 7700 of 7830 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.