Bradyrhizobium jicamae strain PAC68

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium jicamae strain PAC68 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which contribute to its motility. This strain thrives at an optimal temperature of 29°C, placing it within the mesophilic temperature range, making it well-suited for growth in moderate temperature environments. Genetically, Bradyrhizobium jicamae strain PAC68 has been documented to possess a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The strain is cataloged under the accession number LLXZ00000000.1, which provides a reference for researchers seeking to study its genetic and biochemical properties further. An ecological insight into Bradyrhizobium jicamae strain PAC68 is its potential role in symbiotic relationships with plants, particularly in nitrogen fixation. The capacity of this strain to thrive in mesophilic conditions suggests it may be well-adapted to temperate agricultural systems. This adaptation could be beneficial for crop productivity, enhancing soil fertility through the biological fixation of atmospheric nitrogen, thereby reducing the need for chemical fertilizers.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium jicamae
Strainstrain PAC68

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bradyrhizobium jicamae strain PAC68
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium jicamae strain PAC68 contig_98, whole genome

Gene Summary

Adenine Count

1638349 bp

Thymine Count

1638436 bp

Guanine Count

2717734 bp

Cytosine Count

2720459 bp

Genome Length

8738846 bp

Protein-coding Genes

7745 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-hydroxymethyluracil dna glycosylaseCQ12_24105Not AvailableNegative4743621 - 474452633069.8
ubiquinone biosynthesis methyltransferase ubieCQ12_24110Not AvailablePositive4744606 - 474536728259.8
2-polyprenylphenol hydroxylaseCQ12_24115Not AvailablePositive4745364 - 474693857845.8
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthaseCQ12_24120Not AvailablePositive4746997 - 474841850418.9
deoxyuridine 5'-triphosphate nucleotidohydrolaseCQ12_24125Not AvailablePositive4748415 - 474887315574.8
histidine kinaseCQ12_24130Not AvailablePositive4749048 - 475156792107.7
trna threonylcarbamoyladenosine biosynthesis protein tsaeCQ12_24135Not AvailablePositive4751564 - 475308455529.3
pilus assembly protein pilzCQ12_24140Not AvailablePositive4753176 - 475349911879.2
mannose-1-phosphate guanylyltransferaseCQ12_24145Not AvailablePositive4753628 - 475435026120.8
recombinase recbCQ12_24150Not AvailablePositive4754627 - 4757773115287.0

Displaying genes 4261 – 4270 of 7830 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.