Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Stenotrophomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Stenotrophomonas |
| Species | Stenotrophomonas panacihumi |
| Strain | strain JCM 16536 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614144 bp
Thymine Count
608188 bp
Guanine Count
1348663 bp
Cytosine Count
1352160 bp
Genome Length
3923155 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | ARC20_00330 | Q8PI87 | Negative | 820112 - 821224 | 38768.8 |
| shikimate kinase | ARC20_00335 | Q4UX85 | Negative | 821221 - 821766 | 19619.5 |
| kinase | ARC20_00340 | Not Available | Negative | 821853 - 822689 | 29917.6 |
| pyridoxine/pyridoxamine 5'-phosphate oxidase | ARC20_00345 | Q4UX84 | Positive | 822730 - 823329 | 22861.8 |
| hypothetical protein | ARC20_00350 | Not Available | Positive | 823335 - 823691 | 13424.0 |
| mfs transporter | ARC20_00355 | Not Available | Negative | 823688 - 825058 | 46650.9 |
| merr family transcriptional regulator | ARC20_00360 | Q51506 | Positive | 825141 - 825590 | 17010.5 |
| hydroxyacid dehydrogenase | ARC20_00365 | P52643 | Positive | 825653 - 826648 | 35773.1 |
| pyrroline-5-carboxylate reductase | ARC20_00370 | P22008 | Negative | 826656 - 827489 | 28562.3 |
| hypothetical protein | ARC20_00375 | Q46560 | Negative | 827535 - 827831 | 11112.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


