Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Stenotrophomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Stenotrophomonas |
| Species | Stenotrophomonas panacihumi |
| Strain | strain JCM 16536 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614144 bp
Thymine Count
608188 bp
Guanine Count
1348663 bp
Cytosine Count
1352160 bp
Genome Length
3923155 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp diphosphate synthase | ARC20_16490 | Q8PMK9 | Negative | 3803289 - 3804026 | 27599.0 |
| ribosome recycling factor | ARC20_16495 | Q4USQ7 | Negative | 3804060 - 3804617 | 20612.9 |
| uridylate kinase | ARC20_16500 | Q3BVK6 | Negative | 3804725 - 3805447 | 25667.4 |
| diguanylate cyclase | ARC20_16505 | Not Available | Negative | 3805560 - 3807059 | 55247.3 |
| hypothetical protein | ARC20_16515 | Q4UQ11 | Negative | 3807906 - 3808379 | 18020.3 |
| dna processing protein dpra | ARC20_16520 | P43862 | Negative | 3808423 - 3809574 | 39360.4 |
| peptidoglycan-binding protein lysm | ARC20_16525 | Not Available | Negative | 3809646 - 3810770 | 41109.0 |
| peptide deformylase | ARC20_16530 | Q8P4F9 | Positive | 3810902 - 3811414 | 18990.0 |
| methionyl-trna formyltransferase | ARC20_16535 | Q8PG21 | Positive | 3811494 - 3812420 | 32888.8 |
| 16s rrna methyltransferase | ARC20_16540 | Q8P4G1 | Positive | 3812417 - 3813727 | 46865.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


