Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR48_04575 | Not Available | Positive | 984043 - 984990 | 34725.7 |
| peptide abc transporter atp-binding protein | APR48_04580 | Not Available | Negative | 985007 - 985891 | 31054.9 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | APR48_04585 | Not Available | Negative | 985888 - 986454 | 21064.5 |
| excinuclease abc subunit c | APR48_04590 | Not Available | Negative | 986538 - 988523 | 72958.3 |
| gamma-glutamyltransferase | APR48_04595 | Not Available | Positive | 988670 - 990721 | 70183.3 |
| peptidase m20 | APR48_04600 | Not Available | Negative | 990746 - 992185 | 52296.8 |
| hypothetical protein | APR48_04605 | Not Available | Positive | 992262 - 993401 | 41732.6 |
| elongation factor p | APR48_04610 | Not Available | Positive | 993574 - 994128 | 20698.8 |
| 3-isopropylmalate dehydrogenase | APR48_04615 | Not Available | Positive | 994237 - 995103 | 32290.6 |
| transcriptional regulator | APR48_04620 | Not Available | Negative | 995125 - 995832 | 25901.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
