Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna methyltransferase | APR48_04095 | Not Available | Negative | 903518 - 904966 | 53444.3 |
| rna polymerase sigma factor rpos | APR48_04100 | Not Available | Negative | 905018 - 906031 | 37231.0 |
| peptidase | APR48_04105 | Not Available | Negative | 906036 - 906950 | 31394.1 |
| protein-l-isoaspartate o-methyltransferase | APR48_04110 | Not Available | Negative | 906962 - 907753 | 27628.8 |
| stationary phase survival protein sure | APR48_04115 | Not Available | Negative | 907755 - 908513 | 27083.2 |
| nadph:quinone oxidoreductase | APR48_04120 | Not Available | Positive | 908644 - 909630 | 34379.9 |
| histidine biosynthesis protein hisie | APR48_04125 | Not Available | Negative | 909742 - 910089 | 12518.8 |
| hypothetical protein | APR48_04130 | Not Available | Negative | 912349 - 912579 | 8459.34 |
| hypothetical protein | APR48_04135 | Not Available | Positive | 912676 - 912909 | 8561.4 |
| hypothetical protein | APR48_04140 | Not Available | Positive | 913001 - 913276 | 10801.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
