Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter substrate-binding protein | APR48_04045 | Not Available | Negative | 894911 - 895951 | 37858.9 |
| hypothetical protein | APR48_04050 | Not Available | Positive | 896307 - 896834 | 19107.5 |
| hypothetical protein | APR48_04055 | Not Available | Negative | 896859 - 898301 | 51024.7 |
| mfs transporter | APR48_04060 | Not Available | Negative | 898490 - 900046 | 52719.8 |
| hypothetical protein | APR48_04065 | Not Available | Positive | 900191 - 900484 | 10728.9 |
| biopolymer transporter | APR48_04070 | Not Available | Positive | 900496 - 901209 | 25445.9 |
| biopolymer transporter exbd | APR48_04075 | Not Available | Positive | 901215 - 901628 | 15304.4 |
| hemin transporter hemp | APR48_04080 | Not Available | Positive | 901724 - 901936 | 7416.09 |
| hypothetical protein | APR48_04085 | Not Available | Negative | 902138 - 902545 | 13808.7 |
| hypothetical protein | APR48_04090 | Not Available | Positive | 902726 - 903427 | 24739.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
