Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_03995 | Not Available | Negative | 882678 - 883724 | 38039.3 |
| rna polymerase subunit sigma | APR48_04000 | Not Available | Negative | 883813 - 884316 | 18494.0 |
| hypothetical protein | APR48_04005 | Not Available | Positive | 884558 - 885667 | 40282.8 |
| hypothetical protein | APR48_04010 | Not Available | Positive | 885695 - 886732 | 38284.0 |
| luxr family transcriptional regulator | APR48_04015 | Not Available | Positive | 886749 - 887381 | 23159.5 |
| hypothetical protein | APR48_04020 | Not Available | Positive | 887561 - 889966 | 82799.6 |
| amidohydrolase | APR48_04025 | Not Available | Negative | 889982 - 890809 | 30475.5 |
| hydroxyacid dehydrogenase | APR48_04030 | Not Available | Negative | 890838 - 891839 | 35078.1 |
| laci family transcriptional regulator | APR48_04035 | Not Available | Negative | 891872 - 892912 | 37543.2 |
| c4-dicarboxylate abc transporter permease | APR48_04040 | Not Available | Negative | 892962 - 894809 | 65245.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
