Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription accessory protein | APR48_03945 | Not Available | Negative | 869799 - 872168 | 86118.7 |
| hypothetical protein | APR48_03950 | Not Available | Positive | 872366 - 872842 | 17978.8 |
| arsr family transcriptional regulator | APR48_03955 | Not Available | Positive | 872908 - 873285 | 14040.6 |
| hypothetical protein | APR48_03960 | Not Available | Positive | 873389 - 873958 | 20692.5 |
| mate family efflux transporter | APR48_03965 | Not Available | Positive | 873955 - 875367 | 49539.5 |
| 3-demethylubiquinone-9 3-methyltransferase | APR48_03970 | Not Available | Negative | 875371 - 875847 | 17693.4 |
| hypothetical protein | APR48_03975 | Not Available | Negative | 875933 - 877336 | 50864.7 |
| two-component system response regulator | APR48_03980 | Not Available | Negative | 877333 - 877989 | 23654.8 |
| hypothetical protein | APR48_03985 | Not Available | Positive | 878108 - 880159 | 74918.8 |
| ligand-gated channel protein | APR48_03990 | Not Available | Negative | 880163 - 882379 | 80496.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
