Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | APR48_03895 | Not Available | Negative | 857460 - 858422 | 34363.9 |
| 4-hydroxybutyrate dehydrogenase | APR48_03900 | Not Available | Positive | 858562 - 859698 | 40032.4 |
| type vi secretion protein vgr | APR48_03905 | Not Available | Positive | 859865 - 862210 | 86478.9 |
| hypothetical protein | APR48_03910 | Not Available | Positive | 862223 - 862660 | 15912.4 |
| hypothetical protein | APR48_03915 | Not Available | Positive | 862675 - 865332 | 98101.5 |
| low-complexity protein | APR48_03920 | Not Available | Positive | 865329 - 866462 | 41138.9 |
| hypothetical protein | APR48_03925 | Not Available | Positive | 866459 - 867136 | 24217.1 |
| type vi secretion protein | APR48_03930 | Not Available | Positive | 867182 - 867568 | 13435.7 |
| mfs transporter | APR48_03935 | Not Available | Negative | 867591 - 868583 | 34616.9 |
| phospholipase | APR48_03940 | Not Available | Negative | 868687 - 869760 | 40014.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
