Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_03845 | Not Available | Negative | 849329 - 849544 | 7846.74 |
| hypothetical protein | APR48_03850 | Not Available | Negative | 849706 - 850371 | 23956.9 |
| dnaase | APR48_03855 | Not Available | Negative | 850371 - 851177 | 29862.3 |
| pilus assembly protein pilz | APR48_03860 | Not Available | Negative | 851252 - 851668 | 14343.1 |
| dna polymerase | APR48_03865 | Not Available | Negative | 851665 - 852678 | 36115.5 |
| thymidylate kinase | APR48_03870 | Not Available | Negative | 852675 - 853337 | 23726.2 |
| aminodeoxychorismate lyase | APR48_03875 | Not Available | Negative | 853334 - 854356 | 36953.4 |
| folate-binding protein | APR48_03880 | Not Available | Positive | 854510 - 855442 | 31832.4 |
| hypothetical protein | APR48_03885 | Not Available | Positive | 855658 - 856557 | 32198.8 |
| 4-hydroxybenzoyl-coa thioesterase | APR48_03890 | Not Available | Negative | 856565 - 857425 | 31978.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
