Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative portal protein | APR48_14185 | Not Available | Positive | 3005699 - 3007312 | 59410.7 |
| Virion morphogenesis protein | APR48_14190 | Not Available | Positive | 3007652 - 3008788 | 40951.3 |
| Mu-like prophage i protein | APR48_14195 | Not Available | Positive | 3008877 - 3009896 | 35871.3 |
| Hypothetical protein | APR48_14200 | Not Available | Positive | 3009937 - 3010350 | 14134.4 |
| Mu-like prophage major head subunit gpt | APR48_14205 | Not Available | Positive | 3010376 - 3011266 | 33163.1 |
| Hypothetical protein | APR48_14210 | Not Available | Positive | 3011304 - 3011543 | 8551.16 |
| Hypothetical protein | APR48_14215 | Not Available | Positive | 3011719 - 3012225 | 17862.1 |
| Phage virion morphogenesis family protein | APR48_14220 | Not Available | Positive | 3012222 - 3012830 | 22132.6 |
| hypothetical protein | APR48_14225 | Not Available | Positive | 3012830 - 3013441 | 22639.7 |
| hypothetical protein | APR48_14230 | Not Available | Positive | 3013438 - 3013656 | 7972.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
