Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | APR48_03690 | Not Available | Positive | 821903 - 823255 | 47185.2 |
| arac family transcriptional regulator | APR48_03695 | Not Available | Positive | 823324 - 824193 | 31714.0 |
| sam-dependent methyltransferase | APR48_03700 | Not Available | Positive | 824231 - 824845 | 22118.4 |
| hypothetical protein | APR48_03705 | Not Available | Negative | 824876 - 825370 | 17851.1 |
| hypothetical protein | APR48_03710 | Not Available | Positive | 825484 - 826077 | 21445.6 |
| hypothetical protein | APR48_03715 | Not Available | Negative | 826080 - 826289 | 7665.59 |
| acyl-coa dehydrogenase | APR48_03720 | Not Available | Positive | 826483 - 827496 | 35547.2 |
| acetylglucosaminylphosphatidylinositol deacetylase | APR48_03725 | Not Available | Positive | 827484 - 828266 | 28308.8 |
| methyltransferase | APR48_03730 | Not Available | Positive | 828263 - 828877 | 22453.8 |
| glycosyl transferase | APR48_03735 | Not Available | Positive | 828874 - 829578 | 23938.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
