Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | APR48_43835 | Not Available | Negative | 9469342 - 9470436 | 39678.7 |
| hypothetical protein | APR48_43850 | Not Available | Negative | 9472523 - 9473536 | 37774.0 |
| hypothetical protein | APR48_43860 | Not Available | Negative | 9474599 - 9475357 | 27239.5 |
| hypothetical protein | APR48_43870 | Not Available | Negative | 9475825 - 9476214 | 13971.5 |
| gntr family transcriptional regulator | APR48_43880 | Not Available | Positive | 9477264 - 9478034 | 29041.7 |
| hypothetical protein | APR48_43895 | Not Available | Positive | 9479805 - 9480264 | 13099.0 |
| abc transporter atp-binding protein | APR48_43910 | Not Available | Positive | 9481635 - 9482189 | 20465.8 |
| hypothetical protein | APR48_43960 | Not Available | Positive | 9487675 - 9488114 | 15869.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
