Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2fe-2s)-binding protein | APR48_43700 | Not Available | Negative | 9441947 - 9442237 | 10236.2 |
| hypothetical protein | APR48_43705 | Not Available | Negative | 9442234 - 9442498 | 9899.94 |
| transposase | APR48_43710 | Not Available | Positive | 9442850 - 9443200 | 13514.3 |
| dna repair exonuclease | APR48_43725 | Not Available | Negative | 9446307 - 9447125 | 29604.6 |
| diacylglycerol kinase | APR48_43730 | Not Available | Negative | 9447122 - 9448111 | 35188.5 |
| peptidase s41 | APR48_43735 | Not Available | Negative | 9448515 - 9449976 | 51106.9 |
| lysr family transcriptional regulator | APR48_43740 | Not Available | Positive | 9450130 - 9451047 | 33016.1 |
| acetyltransferase | APR48_43745 | Not Available | Negative | 9451054 - 9451737 | 25301.1 |
| abc transporter permease | APR48_43750 | Not Available | Negative | 9451787 - 9452649 | 30494.4 |
| abc transporter permease | APR48_43755 | Not Available | Negative | 9452666 - 9453541 | 31097.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
