Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | APR48_43630 | Not Available | Positive | 9423296 - 9423649 | 12842.3 |
| atpase | APR48_43635 | Not Available | Positive | 9423685 - 9424221 | 19938.7 |
| alpha/beta hydrolase | APR48_43640 | Not Available | Positive | 9424617 - 9425976 | 47908.2 |
| glycerophosphodiester phosphodiesterase | APR48_43645 | Not Available | Negative | 9426022 - 9427020 | 36007.8 |
| hypothetical protein | APR48_43655 | Not Available | Negative | 9429663 - 9431771 | 75276.2 |
| epoxyqueuosine reductase | APR48_43660 | Not Available | Negative | 9431941 - 9432978 | 38104.5 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | APR48_43665 | Not Available | Positive | 9432994 - 9433482 | 17710.9 |
| hypothetical protein | APR48_43680 | Not Available | Negative | 9436075 - 9436428 | 12141.5 |
| hypothetical protein | APR48_43685 | Not Available | Positive | 9436438 - 9438367 | 66195.7 |
| mfs transporter | APR48_43695 | Not Available | Positive | 9440752 - 9441945 | 41638.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
