Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | APR48_43565 | Not Available | Negative | 9412216 - 9413025 | 29513.1 |
| integrase | APR48_43570 | Not Available | Negative | 9413018 - 9414529 | 56225.4 |
| atp-binding protein | APR48_43580 | Not Available | Positive | 9415819 - 9416622 | 29516.5 |
| transporter | APR48_43590 | Not Available | Positive | 9417240 - 9418254 | 34911.4 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | APR48_43595 | Not Available | Positive | 9418247 - 9418975 | 24872.9 |
| ribosomal-protein-alanine acetyltransferase | APR48_43600 | Not Available | Positive | 9418972 - 9419526 | 20278.5 |
| gntr family transcriptional regulator | APR48_43610 | Not Available | Positive | 9419721 - 9420333 | 22383.9 |
| fatty acid desaturase | APR48_43615 | Not Available | Positive | 9420389 - 9421312 | 35195.8 |
| abc transporter permease | APR48_43620 | Not Available | Negative | 9421317 - 9422180 | 30068.9 |
| class a beta-lactamase | APR48_43625 | Not Available | Negative | 9422230 - 9423117 | 30859.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
