Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein gspn | APR48_43510 | Not Available | Negative | 9403228 - 9403900 | 23155.4 |
| hypothetical protein | APR48_43515 | Not Available | Positive | 9404220 - 9404504 | 10563.3 |
| hypothetical protein | APR48_43520 | Not Available | Positive | 9404501 - 9405244 | 27555.6 |
| universal stress protein uspa | APR48_43525 | Not Available | Positive | 9405441 - 9405881 | 15000.2 |
| pseudouridine synthase | APR48_43530 | Not Available | Negative | 9405927 - 9406616 | 25200.5 |
| two-component system response regulator | APR48_43540 | Not Available | Negative | 9407030 - 9407737 | 25692.2 |
| histidine kinase | APR48_43545 | Not Available | Negative | 9407799 - 9409184 | 50392.1 |
| cytochrome c biogenesis protein | APR48_43550 | Not Available | Positive | 9409357 - 9410658 | 46467.4 |
| hypothetical protein | APR48_43555 | Not Available | Negative | 9410660 - 9411160 | 18528.3 |
| (fe-s)-binding protein | APR48_43560 | Not Available | Negative | 9411174 - 9411848 | 24502.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
