Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mercury transport protein merc | APR48_43385 | Not Available | Positive | 9371047 - 9371469 | 14847.4 |
| hypothetical protein | APR48_43390 | Not Available | Positive | 9372778 - 9374172 | 50686.2 |
| hypothetical protein | APR48_43400 | Not Available | Negative | 9378145 - 9378579 | 16249.2 |
| abc transporter substrate-binding protein | APR48_43410 | Not Available | Positive | 9381677 - 9382657 | 34376.7 |
| thioredoxin | APR48_43415 | Not Available | Positive | 9382793 - 9383350 | 20100.0 |
| two-component system response regulator | APR48_43420 | Not Available | Negative | 9383477 - 9384217 | 27943.0 |
| peroxiredoxin | APR48_43425 | Not Available | Positive | 9384484 - 9384903 | 14351.9 |
| abc transporter atp-binding protein | APR48_43430 | Not Available | Positive | 9384951 - 9385658 | 25527.4 |
| abc transporter permease | APR48_43435 | Not Available | Positive | 9385735 - 9386931 | 42733.0 |
| abc transporter permease | APR48_43440 | Not Available | Positive | 9386988 - 9388184 | 42802.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
