Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence factor | APR48_03480 | Not Available | Negative | 744577 - 744807 | 8468.93 |
| hypothetical protein | APR48_03485 | Not Available | Negative | 744994 - 745329 | 12383.1 |
| abc transporter permease | APR48_03490 | Not Available | Negative | 745519 - 746265 | 26668.6 |
| abc transporter substrate-binding protein | APR48_03495 | Not Available | Negative | 746267 - 747529 | 45321.5 |
| abc transporter atp-binding protein | APR48_03500 | Not Available | Negative | 747526 - 748368 | 30280.8 |
| acyl-coa dehydrogenase | APR48_03505 | Not Available | Negative | 748386 - 749462 | 37682.9 |
| alkylhydroperoxidase | APR48_03510 | Not Available | Negative | 749452 - 750036 | 20084.0 |
| cupin | APR48_03515 | Not Available | Negative | 750098 - 751126 | 37295.6 |
| histidine kinase | APR48_03520 | Not Available | Negative | 751184 - 752899 | 61239.3 |
| circadian clock protein kaic | APR48_03525 | Not Available | Negative | 752910 - 754400 | 53526.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
