Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph:quinone reductase | APR48_43150 | Not Available | Positive | 9321246 - 9322256 | 35394.8 |
| chloride channel protein | APR48_43155 | Not Available | Negative | 9322264 - 9324006 | 61237.8 |
| gcn5 family acetyltransferase | APR48_43160 | Not Available | Positive | 9324107 - 9324679 | 21387.4 |
| glycerophosphodiester phosphodiesterase | APR48_43170 | Not Available | Positive | 9324955 - 9326254 | 46911.5 |
| hemolysin d | APR48_43175 | Not Available | Positive | 9326273 - 9326893 | 22153.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | APR48_43180 | Not Available | Negative | 9326903 - 9328204 | 47188.9 |
| transporter | APR48_43185 | Not Available | Negative | 9328244 - 9329473 | 42109.6 |
| gdsl family lipase | APR48_43195 | Not Available | Negative | 9330858 - 9331598 | 26848.2 |
| rna polymerase subunit sigma-70 | APR48_43200 | Not Available | Negative | 9331687 - 9332445 | 26513.2 |
| rna polymerase subunit sigma-24 | APR48_43205 | Not Available | Negative | 9332468 - 9333061 | 22456.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
