Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gcn5 family acetyltransferase | APR48_43100 | Not Available | Negative | 9309734 - 9310252 | 19293.0 |
| 5-oxoprolinase | APR48_43105 | Not Available | Negative | 9310376 - 9313966 | 127541.0 |
| mfs transporter | APR48_43110 | Not Available | Negative | 9314012 - 9315244 | 43852.5 |
| s-transferase | APR48_43115 | Not Available | Positive | 9315432 - 9316310 | 32144.9 |
| glutathione s-transferase | APR48_43120 | Not Available | Positive | 9316317 - 9316928 | 22822.4 |
| phytanoyl-coa dioxygenase | APR48_43125 | Not Available | Negative | 9316925 - 9317758 | 30985.7 |
| arac family transcriptional regulator | APR48_43130 | Not Available | Positive | 9317871 - 9318641 | 28332.3 |
| sulfonate abc transporter atp-binding protein | APR48_43135 | Not Available | Negative | 9318667 - 9319518 | 31018.5 |
| taurine abc transporter permease | APR48_43140 | Not Available | Negative | 9319539 - 9320139 | 21450.7 |
| lysr family transcriptional regulator | APR48_43145 | Not Available | Negative | 9320237 - 9321154 | 33554.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
